feat(pipe): deduplicate read windows before DIAMOND blastx fallback#303
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SNH-star wants to merge 1 commit into
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feat(pipe): deduplicate read windows before DIAMOND blastx fallback#303SNH-star wants to merge 1 commit into
SNH-star wants to merge 1 commit into
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Identical 60bp windows from abundant organisms were sent to DIAMOND individually. Now one representative per unique window is BLASTed and the result propagated to all originals, cutting DIAMOND calls in proportion to sample novelty / smafa failure rate.
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Identical 60bp windows from abundant organisms were sent to DIAMOND individually. Now one representative per unique window is BLASTed and the result propagated to all originals, cutting DIAMOND calls in proportion to sample novelty / smafa failure rate.