Search results

SingleM 0.21.3 crashes on any sequence file claiming "malformed FASTQ", even on ones working previously

Status: Open.

#305 In wwood/singlem;

· dutchscientist opened on Jun 26, 2026

Inquiry on interpretation of output results

Status: Open.

#297 In wwood/singlem;

· ZihengWu opened on Apr 15, 2026

methodological niche & short or long reads

Status: Open.

#296 In wwood/singlem;

· xjhzjucas opened on Apr 9, 2026

SQLite "disk I/O error" when running under SLURM (works on login node)

Status: Open.

#293 In wwood/singlem;

· isidoramorel opened on Mar 31, 2026

trying to build a new eukaryotic species SingleM metapackage

Status: Open.

#286 In wwood/singlem;

· fanch1122 opened on Mar 10, 2026

ERROR: Process (DIAMOND?) failed

Status: Open.

#282 In wwood/singlem;

· LiZhihua1982 opened on Jan 19, 2026

SingleM Pipe error: Unexpected line format for DIAMOND output

Status: Open.

#281 In wwood/singlem;

· magicprotoss opened on Jan 17, 2026

OTU table

Status: Open.

#268 In wwood/singlem;

· Fatemeh-qasemnejad opened on Nov 28, 2025

How did you add off-target entries to metapackage?

Status: Open.

#255 In wwood/singlem;

· Andyargueasae opened on Sep 17, 2025

Downstream statisical tests

Status: Open.

#224 In wwood/singlem;

· lauramason326 opened on Jun 9, 2025

Species-wise EM within vs across samples

Status: Open.

#222 In wwood/singlem;

· lauramason326 opened on May 13, 2025

Output taxonomic-level-coverage has integer levels when 0% species

Status: Open.

#214 In wwood/singlem;

· AroneyS opened on Apr 7, 2025