use protocol_example prefix in example commands#1380
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Update example-command cells (susie_twas/mnm/mnm_genes/fsusie/mvfsusie) and the R sanity-check path to use protocol_example.* as the input/output prefix so docs are copy-paste runnable. Also picks up incidental re-serialization of rss_analysis.ipynb. Workflow definitions unchanged.
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Update example-command cells (susie_twas/mnm/mnm_genes/fsusie/mvfsusie) and the R sanity-check path to use protocol_example.* as the input/output prefix so docs are copy-paste runnable. Also picks up incidental re-serialization of rss_analysis.ipynb. Workflow definitions unchanged.