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tesserae-segmentation
tesserae-segmentation PublicSource code for the paper "Automated Segmentation of Complex Patterns in Biological Tissues: Lessons from Stingray Tessellated Cartilage" from Knötel et al.
C++ 2
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SerialSectionAligner
SerialSectionAligner PublicSemi-automatic Stitching of Serial Section Image Stacks with Filamentous Structures -- Supplementary Software
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filopodia-tool
filopodia-tool PublicSource code for the paper "Semi-automatic Geometrical Reconstruction and Analysis of Filopodia Dynamics in 4D Two-Photon Microscopy Images" from Brence et al.
C++ 1
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Repositories
- filopodia-tool Public
Source code for the paper "Semi-automatic Geometrical Reconstruction and Analysis of Filopodia Dynamics in 4D Two-Photon Microscopy Images" from Brence et al.
- CTCoral_CoDA Public
- CTcoral_CoDA_PyVista Public archive
A simple 3D viewer for CoDA, the visual data analysis and exploration tool.
- SerialSectionAligner Public
Semi-automatic Stitching of Serial Section Image Stacks with Filamentous Structures -- Supplementary Software
- tesserae-segmentation Public
Source code for the paper "Automated Segmentation of Complex Patterns in Biological Tissues: Lessons from Stingray Tessellated Cartilage" from Knötel et al.
- microtubulestitching Public
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