Please see the instruction for reproducing the manuscript results.
MIDAS turns mosaic data into imputed and batch-corrected data to support single-cell multimodal analysis.
| File or directory | Description |
|---|---|
comparison/ |
Scripts for algorithm comparison and qualitative evaluation |
configs/ |
Dataset configuration and MIDAS model configuration |
eval/ |
Scripts for quantitative evaluation |
functions/ |
PyTorch functions for MIDAS |
modules/ |
PyTorch models and dataloader for MIDAS |
preprocess/ |
Scripts for data preprocessing |
utils/ |
Commonly used functions |
README.md |
This file |
run.py |
Script for MIDAS training and inference |