Biomedical scientist | Bioinformatics & genomics | RNA-seq and ChIP-seq | Python, R and Jupyter
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clinical-data-pipeline
clinical-data-pipeline PublicEnd-to-end clinical trial data pipeline on the CDISC SDTM Pilot: quality engine, ADaM derivation with R + admiral, safety analysis, Streamlit dashboard.
Python
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rwe-omop-pipeline
rwe-omop-pipeline PublicReal-World Evidence pipeline on OMOP-standardized synthetic patient data (Eunomia GiBleed). DuckDB + Python + Streamlit. NSAID new-user active-comparator design with confounder adjustment — demonst…
Python
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