An R package to manipulate and explore UK Biobank data
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Feb 22, 2023 - HTML
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uk-biobank
Here are 27 public repositories matching this topic...
3D residual neural network that predicts age based on brain MRI images (implemented using TensorFlow 2).
machine-learning deep-learning keras mri convolutional-neural-networks uk-biobank residual-neural-network tensorflow2 brain-age-prediction
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Mar 17, 2022 - Jupyter Notebook
As a part of COVID-19 Host Genetics Initiative, we perform the following set of analyses to better understand the genetic basis of COVID-19 susceptibility and severity.
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May 7, 2020 - Jupyter Notebook
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
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Jul 12, 2021 - Python
Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records
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Dec 27, 2022 - Python
Prepare UK Biobank Electronic Health Record data for research
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Aug 31, 2022 - R
Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi
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Feb 26, 2021 - R
PyTorch implementation for 2.5D U-Net segmentation of UK Biobank neck-to-knee body MRI
deep-learning pytorch mri neural-networks kidney segmentation semantic-segmentation uk-biobank u-net parenchyma
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Feb 10, 2023 - Python
A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.
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Jul 7, 2022 - C++
Prepare electronic medical record data from the UK Biobank for time-to-event analyses
r rstats r-package data-processing uk-biobank time-to-event electronic-medical-records rstats-package
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Sep 10, 2025 - R
KCL Interface to UKB Project Data on Rosalind HPC cluster
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Apr 22, 2023 - R
This repository accompanies our Cell Metabolism manuscript "Plasma protein-based organ-specific aging and mortality models unveil diseases as accelerated aging of organismal systems"
disease lifestyle diet mortality elastic-net uk-biobank blood-plasma organ-specific-aging proteomic-clocks aging-models longevity-interventions
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Jan 5, 2026 - R
Create binary traits for UKbio using ICD/OPER/medication/self reports/age of diagnosis/visit-dates etc). The current output includes variables on history, study visit, future, time-to-first-event, episode-duration. this is a starting point to construct your favorite trait in ukb. The code was written on the go, so not super clean code..
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Apr 29, 2020 - R
Neural Networks for Deep Regression on UK Biobank neck-to-knee body MRI
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Feb 10, 2023 - Python
A python CLI to setup and manage a UKB project directory
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May 12, 2022 - Python
Code sets for Electronic Health Record research
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Nov 25, 2024
R toolkit for UK Biobank data analysis - field parsing, ICD processing, and clinical variable extraction
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Apr 18, 2026 - R
(Shiny App) Interactive Olink Proteomics Explorer for UK Biobank. Features triangulation of 3,000+ protein-trait associations with genetic variants (PNPLA3/TM6SF2) and transcriptomic filtering (GTEx & scRNA-seq) for liver disease research.
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Jan 14, 2026 - R
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