Tool to analyze bacterial fluorescence in time-lapse microscopy
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Feb 3, 2026 - Jupyter Notebook
#
genetic-circuits
Here are 9 public repositories matching this topic...
A playable genetic circuit simulation game where players test logic-based inputs (IPTG, AHL, aTc) and navigate synthetic feedback loops. Built with Tellurium, Streamlit, and a custom FSM engine. Includes two working levels and real-time biological modeling.
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Jun 30, 2025 - Python
My submissions for the Advanced Special Topics I course that I took at UNBC in 2021.
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Nov 7, 2021
A synthetic biology logic circuit that combines memory, logic gating, and reset to simulate FSM-like behavior using AraC, IPTG, AHL, and GFP.
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Jun 30, 2025 - Jupyter Notebook
A state-driven Multi-Agent framework for automated genetic circuit design. Combines RAG, ODE simulations, and Human-in-the-Loop verification to compile natural language into Cello Verilog netlists.
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Apr 21, 2026 - Python
Another Genetic Circuit Transcriber
kotlin genetics dsl biochemistry kotlin-dsl domain-specific-language genetic genetic-regulatory-network biochemical biochemical-reactions biochemical-networks genetic-circuits
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Oct 7, 2021 - Kotlin
Repositorio de código del TFG de Física. Modelo del reloj de segmentación de la somitogénesis.
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Sep 3, 2023 - C
Proyecto de sistemas dinamicos basado en el circuito genetico Repressilator.
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Apr 29, 2022 - Python
Code for preprint "A Linear Mixed Effects Model for Evaluating Synthetic Gene Circuits"
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Nov 4, 2025 - Jupyter Notebook
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