#
diatoms
Here are 4 public repositories matching this topic...
An end-to-end computer vision pipeline for automated diatom extraction, detection (YOLOv8), and classification (ResNet/Fastai).
python bioinformatics computer-vision deep-learning pytorch image-classification fastai marine-biology diatoms
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Jul 30, 2026 - Jupyter Notebook
To explore diatom community structure dynamic and distribution over time (8years) around Australian coastal water (IMOS NRS station) and to identify abiotic (e.i. temperature, nutrients.. etc) and biotic (bacteria) factor that influence them. This was through analysis of 18S and 16S rRNA data available form the Australaian Microbiome Initiative.
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Mar 28, 2025
A DADA2 pipeline using rbcl markers libraries and a Phyloseq script to output graphical results.
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Apr 12, 2024 - R
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