2026-05: this repo is replaced by our new software that is substantially more efficiency and (hopefully) easier to use. We strongly recommend you to use the new software as we cannot guarantee the maintenance of this repo.
FICTURE: Scalable segmentation-free analysis of sub-micron resolution spatial transcriptomics
Install
pip install ficture
Documentation https://seqscope.github.io/ficture/
Paper (Real data results in the preprint are available on Zenodo)
For a brief introduction, see slides used for AGBT talk