A custom visualization I developed to visualize some issues in AREDS 1 severity scale that affected our analysis.
This repo is a snippet for the R code to create the visualization in Supplemental Figure 1 in: Seddon et al. Rare and Common Genetic Variants, Smoking, and Body Mass Index: Progression and Earlier Age of Developing Advanced Age-Related Macular Degeneration (2020). (PUBMED LINK)
See Blog post.
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| Tool | Purpose |
|---|---|
| R | main code |
| ggplot2 | Data visualization package |
| SAS* | Data preparation (not in this repo) |
I put my code here, mostly for the visualization part of this project as this is my main analysis contribution. Since AREDS data, while public, requires credential and research proposal, I cannot put the data here.
Dr. Johanna Seddon and Dr. Bernard Rosner
Seddon JM, Widjajahakim R, Rosner B. Rare and Common Genetic Variants, Smoking, and Body Mass Index: Progression and Earlier Age of Developing Advanced Age-Related Macular Degeneration. Invest Ophthalmol Vis Sci. 2020;61(14):32. doi:10.1167/iovs.61.14.32
Archived · Research Work · [2020]