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deletion_scanning

Analysis scripts accompanying the study:

Gigabase-scale deletion scanning of the human genome

This repository contains scripts used for processing sequencing data and generating analyses for experiments involving programmable Cas3-mediated genomic deletion scanning and Shred-seq-based deletion genotyping.

Overview

The repository includes scripts for analysis of:

  • TODO

Raw sequencing data and processed data files are deposited in the Sequence Read Archive (SRA) / Gene Expression Omnibus (GEO) under accession number PRJNA1469634.

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Repository containing code and intermediate data files for the "Gigabase-scale deletion scanning of the human genome" preprint

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