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Evaluate migration from polars to pyarrow + pandas (with measurement plan)

Status: Open.

#69 In openvax/gtfparse;

· iskandr opened on May 13, 2026

Optional incompleteness flag for required features (start_codon / stop_codon / CDS pairs)

Status: Open.

#66 In openvax/gtfparse;

· iskandr opened on May 13, 2026

create_missing_features: opt-in / configurable strictness for synthesized parent rows

Status: Open.

#65 In openvax/gtfparse;

· iskandr opened on May 13, 2026

Pin numpy to 1.X.X

Status: Open.

#55 In openvax/gtfparse;

· kennyworkman opened on Mar 10, 2025

Tests fail when using the PYPI tarball because the 'data' module is missing

Status: Open.

#53 In openvax/gtfparse;

· yurivict opened on Dec 6, 2024

pandas is imported but isn't listed in https://github.com/openvax/gtfparse

Status: Open.

#52 In openvax/gtfparse;

· yurivict opened on Nov 12, 2024

DeprecationWarning: The argument dtypes for read_csv is deprecated.

Status: Open.

#50 In openvax/gtfparse;

· dchen116 opened on Oct 28, 2024

Error in gtfparse when calling vcf-expression-annotator

Status: Open.

#49 In openvax/gtfparse;

· lukaas33 opened on Aug 26, 2024

Update gtfparse to support pyarrow >=0.15

Status: Open.

#47 In openvax/gtfparse;

· jdcla opened on May 9, 2024

ImportError: cannot import name table_to_blockmanager

Status: Open.

#45 In openvax/gtfparse;

· gokceneraslan opened on Jan 25, 2024

Fix bug for records with ";" in the value

Status: Open.

#44 In openvax/gtfparse;

· y9c opened on Jan 17, 2024

Bioconda wrong dependencies for version 2.1.0

Status: Open.

#43 In openvax/gtfparse;

· jpintar opened on Dec 29, 2023