4399 encore schema

app/models/entities/Evidences.scala

@@ -126,14 +126,12 @@ case class Evidence(
     statisticalTestTail: Option[String],
     interactingTargetFromSourceId: Option[String],
     phenotypicConsequenceLogFoldChange: Option[Double],
-    phenotypicConsequenceFDR: Option[Double],
     phenotypicConsequencePValue: Option[Double],
     geneticInteractionScore: Option[Double],
-    geneticInteractionPValue: Option[Double],
     geneticInteractionFDR: Option[Double],
     biomarkerList: Option[Seq[NameAndDescription]],
     projectDescription: Option[String],
-    geneInteractionType: Option[String],
+    geneticInteractionType: Option[String],
     targetRole: Option[String],
     interactingTargetRole: Option[String],
     ancestry: Option[String],
@@ -153,7 +151,14 @@ case class Evidence(
     qualityControls: Seq[String],
     publicationDate: Option[String],
     evidenceDate: Option[String],
-    metaTotal: Int = 0
+    metaTotal: Int = 0,
+    validationReadouts: Seq[ValidationReadouts]
+)
+
+case class ValidationReadouts(readoutMethodName: Option[String],
+                              hsaValue: Option[Double],
+                              screen: Option[String],
+                              isValidated: Option[Boolean]
 )
 
 case class Evidences(count: Int, cursor: Option[String], rows: IndexedSeq[Evidence])
@@ -163,6 +168,9 @@ object Evidences {
   implicit val getEvidenceFromDB: GetResult[Evidence] =
     GetResult(fromPositionedResult[Evidence])
 
+  implicit val validationReadoutsImp: OFormat[ValidationReadouts] =
+    Json.format[ValidationReadouts]
+
   implicit val nameAndDescriptionJsonFormatImp: OFormat[NameAndDescription] =
     Json.format[NameAndDescription]
 

app/models/gql/Objects.scala

@@ -4,7 +4,7 @@ import models.*
 import models.entities.Configuration.*
 import models.entities.*
 import models.gql.Arguments.*
-import models.gql.Fetchers.{diseasesFetcher, *}
+import models.gql.Fetchers.*
 import models.Helpers.ComplexityCalculator.*
 import models.entities.ClinicalIndications.{
   clinicalIndicationsFromDiseaseImp,
@@ -13,7 +13,6 @@ import models.entities.ClinicalIndications.{
 import models.entities.ClinicalTargets.clinicalTargetsImp
 import sangria.macros.derive.*
 import sangria.schema.*
-
 import scala.concurrent.ExecutionContext.Implicits.global
 import scala.concurrent.*
 import models.entities.Violations.{InputParameterCheckError, InvalidArgValueError}
@@ -2976,6 +2975,8 @@ object Objects extends OTLogging {
     DocumentField("shortName", "Short name of the assay")
   )
 
+  implicit val validationReadoutsImp: ObjectType[Backend, ValidationReadouts] = deriveObjectType()
+
   implicit val evidenceImp: ObjectType[Backend, Evidence] = deriveObjectType(
     ObjectTypeName("Evidence"),
     ObjectTypeDescription(
@@ -3086,17 +3087,13 @@ object Objects extends OTLogging {
     DocumentField("statisticalTestTail", "End of the distribution the target was picked from"),
     DocumentField("interactingTargetFromSourceId", "Identifer of the interacting target"),
     DocumentField("phenotypicConsequenceLogFoldChange", "Log 2 fold change of the cell survival"),
-    DocumentField("phenotypicConsequenceFDR", "False discovery rate of the genetic test"),
-    DocumentField("phenotypicConsequencePValue", "P-value of the the cell survival test"),
     DocumentField(
       "geneticInteractionScore",
       "The strength of the genetic interaction. Directionality is captured as well: antagonistics < 0 < cooperative"
     ),
-    DocumentField("geneticInteractionPValue", "P-value of the genetic interaction test"),
-    DocumentField("geneticInteractionFDR", "False discovery rate of the genetic interaction test"),
     DocumentField("biomarkerList", "List of biomarkers associated with the biological model"),
     DocumentField("projectDescription", "Description of the project that generated the data"),
-    DocumentField("geneInteractionType", "Description of the interaction between the two genes"),
+    DocumentField("geneticInteractionType", "Description of the interaction between the two genes"),
     DocumentField("targetRole", "Role of a target in the genetic interaction test"),
     DocumentField("interactingTargetRole", "Role of a target in the genetic interaction test"),
     DocumentField("assays", "Assays used in the study"),