3DS soil model (soil3ds)

This is '3DS soil model' (soil3ds), a 3D Soil model of soil for water and N balances adapted from the STICS soil module.

See

• Louarn G, Faverjon L, Migault V, Escobar-Gutiérrez A, Combes D. (2016). Assessment of ‘3DS’, a soil module for individual-based models of plant communities. In: IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA), 125–132. doi: 10.1109/FSPMA.2016.7818298
• N. Brisson, M. Launay, B. Mary, N. Beaudoin (2008) Conceptual basis, formalisations and parameterization of the STICS crop model, Quae, Versailles.
• N. Brisson & A. Perrier (1991). A semi-empirical model of bare soil evaporation for crop simulation models. Water resources research, 27(5), 719-727.
• Lebon, E., Dumas, V., Pieri, P., & Schultz, H. R. (2003). Modelling the seasonal dynamics of the soil water balance of vineyards. Functional Plant Biology, 30(6), 699-710.

Installation

First, Conda needs to be installed, see instruction on openaleala documentation.

for user

Creating a new conda environment with soil3ds and its dependencies installed

mamba create -n soil3ds -c openalea3 -c openalea3 -c conda-forge openalea.soil3ds

for developer

mamba env create -f ./conda/environment.yml

This will create a conda environment with dependencies installed and install soil3ds in editable state.

Examples

To run a simulation example :

1. place yourself in folder examples
2. run from the console:

     python example_3D.py

Contact

For further assistance, you can reach out to the development team creating an issue on github

Authors

Gaëtan LOUARN, Eric LEBON - see file AUTHORS for details

License

This project is licensed under the CeCILL-C License - see file LICENSE for details