rsomics-bed-makewindows

Tile a genome into fixed-size BED windows.

Usage

rsomics-bed-makewindows -g <genome.txt> -w <INT> [OPTIONS]
rsomics-bed-makewindows -g hg38.genome -w 100
rsomics-bed-makewindows -g hg38.genome -w 50 -s 25   # 50 bp windows, step 25 (overlapping)

Origin

Rust reimplementation of bedtools makewindows based on the bedtools documentation and black-box behaviour testing.

License: MIT OR Apache-2.0. Upstream credit: bedtools https://bedtools.readthedocs.io/ (MIT).