Skip to content

Add script originally used to add Cellomics data to Mongo#6

Open
starcalibre wants to merge 1 commit into
microscopium:masterfrom
starcalibre:cellomics-mongo
Open

Add script originally used to add Cellomics data to Mongo#6
starcalibre wants to merge 1 commit into
microscopium:masterfrom
starcalibre:cellomics-mongo

Conversation

@starcalibre

Copy link
Copy Markdown
Member

Lines 147-150 show how to save images as Binary strings!

The nearest Neighbours were calculated using the scikit-learn NearestNeighbors function -- no dimensionality reduction was applied, it was just done over the standardised features.

Comment thread cellomics_mongo.py

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Time to switch to Python 3! =)

For this script, a comment at the top specifying Python 2.7 will suffice.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants