Add script for classification analysis of BBBC021 dataset after feature reduction#15
Add script for classification analysis of BBBC021 dataset after feature reduction#15DragaDoncila wants to merge 4 commits into
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…d UMAP on BBBC021 dataset
| cnf_matrix = confusion_matrix(y, y_pred) | ||
| np.set_printoptions(precision=2) | ||
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| # Plot confusion matrix |
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There are large blocks of commented out code here. Is that because they are incorrect/buggy (and should be deleted), or because they are optional (and should be made into functions instead)?
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They are optional, and should be functions instead
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Would you be able to bundle them up into functions then? Thanks for submitting the PR!
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Yep, can do, but not until Friday at the earliest sorry!
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There's no rush, you don't have to be sorry. It's certainly not holding anything else up, this is very self contained.
| all_names_montage.extend(names_montage) | ||
| run_montage(sorted_filenames, names_montage) | ||
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| ## run features on images |
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Why is this section commented out?
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Once each section of the code was run, we commented out to speed things up. In a situation where you're running on a raw unprocessed directory, you'd need every part uncommented
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