Goo visualization dashboard

An interactive visualization dashboard for Goo simulation data, built with Dash and Plotly.

Installation

Install directly from GitHub:

pip install -e git+https://github.com/megasonlab/gooviz.git

Usage

Run the dashboard with:

python -m gooviz.cli path/to/your/data.h5 --debug --port 8050

Command Line Arguments

• --debug: Enable debug mode (default: False)
• --port: Specify the port number (default: 8050)

Controls

• Frame Selection: Use the slider to navigate through simulation frames
• View Mode: Toggle between 2D and 3D views
• Color By: Choose between volume or pressure for cell coloring
• Size By: Choose between volume or pressure for cell sizing

Development

Project Structure

goo-visualization/
├── src/
│   └── gooviz/
│       ├── __init__.py
│       ├── cli.py
│       ├── data_loader.py
│       └── visualizer.py
├── examples/
│   └── out.h5
├── pyproject.toml
└── README.md

License

This project is licensed under the BSD 3-Clause License - see the LICENSE file for details.

Acknowledgments

• Built with Dash and Plotly