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.github/profile/README.md

Hi, I'm Florian 👋

I'm a PhD researcher in an industrial collaboration working at the interface of bioprocess engineering, scientific machine learning, and experimental optimization.

My work focuses on building data-driven and hybrid modeling workflows for biological processes, including protein refolding, fermentation, and downstream processing. I am especially interested in how Bayesian optimization, mechanistic models, and uncertainty-aware machine learning can work together and support better experimental decision-making.

Current interests

  • Hybrid mechanistic / machine learning models for bioprocesses
  • Bayesian optimization for experimental design
  • Scientific machine learning and AI for engineering
  • Protein refolding, inclusion bodies, and downstream process development
  • Uncertainty quantification for model-based decisions
  • AI Agents and agentic workflows

Selected work and projects

  • Hybrid ODE/ML models
  • (Physics-informed) Bayesian optimization workflows for process optimization
  • Soft-sensors for monitoring of protein refolding
  • AI Agents for smart tech transfer in biopharmaceutical industry

Tools I use

Python · JAX · Equinox · Diffrax · PyTorch · BoTorch · GPyTorch · NumPy · pandas · matplotlib

Find me

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  1. bayesopt-fluorescence bayesopt-fluorescence Public

    Multi-objective Bayesian optimization under physical constraints for fluorescence-guided protein refolding experiments using Gaussian process surrogate models and qNEHVI acquisition.

    Python 1

  2. FluoroSense FluoroSense Public

    Interactive fluorescence spectroscopy platform for monitoring protein folding and refolding kinetics from Jasco spectrofluorometer data. Features intrinsic tryptophan/tyrosine emission analysis, re…

    Python 2

  3. LysoSense LysoSense Public

    Python

  4. SEM_Image_Analysis SEM_Image_Analysis Public

    Forked from Lasakek/SEM_Image_Analysis

    Python