Common/auto log report#78
Merged
Merged
Conversation
MareikeJaniak
marked this pull request as ready for review
June 29, 2026 14:40
Collaborator
Author
|
Multiqc has been updated on cvmfs and version is bumped on all pipelines. Ready for review and then merge to dev. |
paulstretenowich
approved these changes
Jul 6, 2026
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Adding final step to all pipelines that creates the log report tsv automatically. Tested on ampliconseq so far, to be tested with all pipelines as part of cit run in dev.
Also bumped version of MultiQC for all pipelines to 1.33. To be bumped to 1.35 when available.
Base branch:
dev