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simple HC WDL Code checks #299: Commit fc5ad7c pushed by davidbenjamin
7m 37s db_hc_wdl
db_hc_wdl
7m 37s
change jar Code checks #298: Commit 0bfabb1 pushed by davidbenjamin
8m 15s db_active_jar
db_active_jar
8m 15s
renamed GATK jar to avoid spurious cache hit Code checks #297: Commit 2a7f884 pushed by davidbenjamin
6m 0s db_active_jar
db_active_jar
6m 0s
Test time adaptation and option to refine specific parameters (#281) Code checks #296: Commit ac61407 pushed by davidbenjamin
7m 54s v0.8.0
v0.8.0
7m 54s
and in dbSNP WDL Code checks #295: Commit 5c96604 pushed by davidbenjamin
8m 25s db_aou_germline_resource
db_aou_germline_resource
8m 25s
dbSNP python script can do hg19 or hg38 Code checks #294: Commit 468e228 pushed by davidbenjamin
8m 22s db_aou_germline_resource
db_aou_germline_resource
8m 22s
fix: resolve pruning pipeline bugs Code checks #293: Commit 0137d52 pushed by nh13
7m 32s nh/fix-pruning-pipeline
nh/fix-pruning-pipeline
7m 32s
fix: resolve pruning pipeline bugs Code checks #292: Commit de07b2c pushed by nh13
7m 37s nh/fix-pruning-pipeline
nh/fix-pruning-pipeline
7m 37s
feat: support Python 3.13 by bumping cyvcf2 to >=0.32 Code checks #291: Commit ffe5138 pushed by nh13
7m 44s nh/support-python-3.13
nh/support-python-3.13
7m 44s
docs: add bioconda badge and installation instructions Code checks #290: Commit 989375e pushed by nh13
8m 47s nh/add-bioconda-badge
nh/add-bioconda-badge
8m 47s
ref dict merge Code checks #289: Commit 3cdb1ea pushed by davidbenjamin
7m 27s db_aou_germline_resource
db_aou_germline_resource
7m 27s
merge VCF WDL Code checks #288: Commit 1333383 pushed by davidbenjamin
8m 15s db_aou_germline_resource
db_aou_germline_resource
8m 15s
switched to active.jar for GATK in Dockerfile Code checks #287: Commit 3d792f0 pushed by davidbenjamin
9m 4s db_active_jar
db_active_jar
9m 4s
first normalize Code checks #286: Commit ff9f762 pushed by davidbenjamin
7m 31s db_aou_germline_resource
db_aou_germline_resource
7m 31s
differetn bcftools command Code checks #285: Commit ad911d0 pushed by davidbenjamin
7m 34s db_aou_germline_resource
db_aou_germline_resource
7m 34s
whoops Code checks #284: Commit 881a9b9 pushed by davidbenjamin
8m 7s db_aou_germline_resource
db_aou_germline_resource
8m 7s
set min AC to 2 in AoU Code checks #283: Commit 5825100 pushed by davidbenjamin
4m 0s db_aou_germline_resource
db_aou_germline_resource
4m 0s
python script bug fix for SGDP edge case Code checks #282: Commit 3ecf1c8 pushed by davidbenjamin
7m 39s db_aou_germline_resource
db_aou_germline_resource
7m 39s
another bug fix for weird contigs in dbSNP script Code checks #281: Commit 77663b8 pushed by davidbenjamin
5m 55s db_aou_germline_resource
db_aou_germline_resource
5m 55s
if contig is None continue in dbsnp Code checks #280: Commit 485f5ef pushed by davidbenjamin
8m 18s db_aou_germline_resource
db_aou_germline_resource
8m 18s
docker image staph Code checks #279: Commit 6b1bd18 pushed by davidbenjamin
7m 28s db_aou_germline_resource
db_aou_germline_resource
7m 28s
different biocontainers/bcftools tag Code checks #278: Commit 087aab9 pushed by davidbenjamin
8m 23s db_aou_germline_resource
db_aou_germline_resource
8m 23s
dbSNP script works locally Code checks #277: Commit b1b87cf pushed by davidbenjamin
9m 9s db_aou_germline_resource
db_aou_germline_resource
9m 9s
Switch to anaconda3 docker Code checks #276: Commit 311f990 pushed by davidbenjamin
8m 15s db_aou_germline_resource
db_aou_germline_resource
8m 15s
some work on the dbSNP WDL and python script Code checks #275: Commit ef28049 pushed by davidbenjamin
8m 19s db_aou_germline_resource
db_aou_germline_resource
8m 19s