Ex-bench scientist (built BAC libraries, Positional-cloned maize gene, ran mass spec) building Python/R tools for single-cell & spatial transcriptomics
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Regulons-Connection-Specificity-Index-calculation
Regulons-Connection-Specificity-Index-calculation PublicCSI calculation according to Bass et al. Nature methods(2013), modified from FloWuenne/scFunctions
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SpatialDE
SpatialDE PublicForked from Teichlab/SpatialDE
Test genes for Spatial Variation
Jupyter Notebook
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Integrated-Visium-Spatial-transcriptomics-data
Integrated-Visium-Spatial-transcriptomics-data PublicIntegrated 10x Genomics Visium Spatial transcriptomics data using one line of code
R
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