simexp_ideal_scalhom_icon-eclm-parflow_wfe-case vs. HPSCTerrSys/TSMP2_workflow-engine

.gitattributes

@@ -0,0 +1,2 @@
+master.conf merge=ours
+expid.conf merge=ours

.gitmodules

@@ -4,36 +4,33 @@
 	branch = master
 [submodule "nml/icon"]
 	path = nml/icon
-	url = https://github.com/HPSCTerrSys/namelist_ICON_CORDEX-EUR-11u.git
+	url = https://github.com/HPSCTerrSys/namelist_ICON_fs-idealnwp.git
 	branch = master
 [submodule "nml/parflow"]
 	path = nml/parflow
-	url = https://github.com/HPSCTerrSys/namelist_ParFlow_CORDEX-EUR-11u.git
+	url = https://github.com/HPSCTerrSys/namelist_ParFlow_fs-idealnwp.git
 	branch = master
 [submodule "nml/oasis"]
 	path = nml/oasis
-	url = https://github.com/HPSCTerrSys/namelist_oasis3-mct_TSMP2-real-template.git
+	url = https://github.com/HPSCTerrSys/namelist_oasis3-mct_ideal-template.git
 	branch = master
 [submodule "src/TSMP2"]
 	path = src/TSMP2
 	url = https://github.com/HPSCTerrSys/TSMP2.git
 	branch = master
 [submodule "dta/geo/icon"]
 	path = dta/geo/icon
-	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_icon_cordex-eur-11u.git
+	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_icon_scalhom.git
 	branch = master
 [submodule "dta/geo/oasis"]
 	path = dta/geo/oasis
-	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_oasis3-mct_cordex-eur-11u.git
+	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_oasis3-mct_scalhom.git
 	branch = master
 [submodule "dta/geo/eclm"]
 	path = dta/geo/eclm
-	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_eclm_cordex-eur-11u.git
+	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_eclm_scalhom.git
 	branch = master
 [submodule "dta/geo/parflow"]
 	path = dta/geo/parflow
-	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_parflow_cordex-eur-11u.git
+	url = https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_parflow_scalhom.git
 	branch = master
-[submodule "src/eCLM_atmforcing"]
-	path = src/eCLM_atmforcing
-	url = https://github.com/HPSCTerrSys/eCLM_static-file-generator.git

ctl/expid.conf

@@ -12,30 +12,33 @@
 # SIM
 ###
 [sim_config_general]
+lreal=false
+domain_size_str=${CASE_ID:17:4}
+domain_size=$(echo "$domain_size_str" | sed 's/^0*//') #$((10#$domain_size_str))
 
 [sim_config_icon]
-icon_numioprocs=3
-fname_dwdFG=dwdFG_R13B05_DOM01.nc
-fname_icondomain=europe011_DOM01.nc
-fname_iconextpar=external_parameter_icon_europe011_DOM01_tiles.nc
-fname_iconghgforc=bc_greenhouse_rcp45_1765-2500.nc
+icon_numioprocs=1
+domainfile_icon=static/torus_grid_x${domain_size_str}_y${domain_size_str}_e2000m.nc
+icon_mapfile_lbc=map_file.lbc
 
 [sim_config_clm]
-domainfile_clm=domain.lnd.ICON-11_ICON-11.230302_landlake_halo.nc
-surffile_clm=surfdata_ICON-11_hist_16pfts_Irrig_CMIP6_simyr2000_c230302_gcvurb-pfsoil_halo.nc
+domainfile_clm=domain_${domain_size_str}x${domain_size_str}_e2000.nc
+surffile_clm=surfdata_${domain_size_str}x${domain_size_str}_e2000_${CASE_ID:0:11}.nc
+topofile_clm=topodata_0.9x1.25_zeroed.nc
 clmoutvar='TWS','H2OSOI','TSOI','TG','EFLX_LH_TOT','FSH','FSA','FSR','FIRA','Rnet','EFLX_SOIL_GRND'
+fini_clm=" "
+clm_frc_dir=${geo_dir}/eclm/forcing/${domain_size_str}x${domain_size_str}
 
 [sim_config_parflow]
-pfl_ngx=444
-pfl_ngy=432
-pfl_mask=PfbMask4SolidFile_eCLM.pfsol
-pfloutmfilt=24
-pfltsfilerst=$((pfloutmfilt - 1))
+pfl_ngx=${domain_size}
+pfl_ngy=${domain_size}
+fini_pfl=${geo_dir}/parflow/init/rur_ic_press_${domain_size_str}x${domain_size_str}_${CASE_ID:6:5}_${CASE_ID:12:4}.pfb
 
 [sim_config_oas]
-icon_ncg=189976
-clm_ngx=189976
+icon_ncg=$((${domain_size} * ${domain_size} * 2))
+clm_ngx=$((${domain_size} * ${domain_size} * 2))
 clm_ngy=1
+geo_dir_oas=${geo_dir}/oasis/static/${domain_size_str}x${domain_size_str}/
 
 ###
 # POS

ctl/master.conf

@@ -3,9 +3,9 @@
 ######
 
 # main settings
-MODEL_ID=ICON-eCLM-ParFlow #ParFlow #ICON-eCLM #ICON-eCLM-ParFlow #ICON
-EXP_ID="eur-11u"
-CASE_ID="" # identifier for cases
+MODEL_ID=ICON-eCLM-ParFlow #ICON-eCLM-ParFlow
+EXP_ID="scalhom"
+CASE_ID="pft13-sID02-Sv06_0070" # identifier for cases
 conf_file="" # configure file for cases, also possible ${EXP_ID}.conf
 
 # main switches (PREprocessing, SIMulations, POSt-processing, VISualisation)
@@ -15,10 +15,10 @@ lpos=( false false false ) # config, run, cleanup
 lvis=( false false false ) # config, run, cleanup
 
 # time information
-cpltsp_atmsfc=900 # coupling time step, atm-sfc, eCLM timestep [sec]
-cpltsp_sfcss=900 # coupling time step, sfc-ss, ParFlow timestep [sec]
+cpltsp_atmsfc=600 # coupling time step, atm-sfc, eCLM timestep [sec]
+cpltsp_sfcss=600 # coupling time step, sfc-ss, ParFlow timestep [sec]
 simlength="1 day" #"23 hours"
-startdate="2017-07-01T00:00Z" # ISO norm 8601
+startdate="2015-07-01T00:00Z" # ISO norm 8601
 inidate=${startdate} # ISO norm 8601, fix for entire simulation
 numsimstep=1 # number of simulation steps, simulation period = numsimstep * simlength
 
@@ -44,12 +44,12 @@ tsmp2_install_dir="" # leave empty to use default
 tsmp2_env="" # leave empty to use default
 
 # number of nodes per component (<comp>_node will be set to zero, if not indicated in MODEL_ID)
-ico_node=3
+ico_node=1
 clm_node=1
-pfl_node=2
+pfl_node=1
 
 # DebugMode: No job submission. Just config
-debugmode=false
+debugmode=true
 
 # log job status
 joblog=true

ctl/sim_ctl/sim_config.sh

@@ -61,6 +61,7 @@ if [[ "${modelid}" == *icon* ]]; then
   icon_numioprocs=${icon_numioprocs:-1}
   icon_numrstprocs=${icon_numrstprocs:-0}
   icon_numprefetchproc=${icon_numprefetchproc:-1}
+  domainfile_icon=${domainfile_icon:-europe011_DOM01.nc}
   icon_mapfile_lbc=${icon_mapfile_lbc:-dict.latbc}
   [ "${icon_numrstprocs}" -eq 0 ] && icon_rstmode="sync" || icon_rstmode="dedicated procs multifile"
   # this method just works for simlength <= 1 month, ICON src changes needed
@@ -102,6 +103,7 @@ if [[ "${modelid}" == *icon* ]]; then
   sed -i "s/__num_io_procs__/${icon_numioprocs}/" NAMELIST_icon
   sed -i "s/__num_restart_procs__/${icon_numrstprocs}/" NAMELIST_icon
   sed -i "s/__num_prefetch_proc__/${icon_numprefetchproc}/" NAMELIST_icon
+  sed -i "s#__domainfile_icon__#${domainfile_icon}#" NAMELIST_icon
   sed -i "s#__ecraddata_dir__#ecraddata#" NAMELIST_icon # needs to be short path in ICON v2.6.4
   sed -i "s/__dateymd__/${dateymd}/" NAMELIST_icon
   sed -i "s/__outdatestart__/$(date -u -d "${startdate}" +%Y-%m-%dT%H:%M:%SZ)/" NAMELIST_icon
@@ -141,6 +143,7 @@ if [[ "${modelid}" == *clm* ]]; then
 #  fini_clm=${rst_dir}/$(date -u -d "${datem1}" +%Y%m%d)/eclm/eCLM_eur-11u.clm2.r.$(date -u -d "${startdate}" +%Y-%m-%d)-00000.nc
   topofile_clm=${topofile_clm:-topodata_0.9x1.25_USGS_070110_stream_c151201.nc}
   fini_clm=${fini_clm:-${simrstm1_dir}/eclm/eCLM_eur-11u.clm2.r.$(date -u -d "${startdate}" +%Y-%m-%d)-$(printf "%05d" $(( $(date -d "${startdate}" +%s) % 86400 ))).nc}
+  clm_frc_dir=${clm_frc_dir:-${frc_dir}/eclm/forcing/}
 
 # link executeable
 #  ln -sf $tsmp2_install_dir/bin/eclm.exe eclm
@@ -199,7 +202,7 @@ if [[ "${modelid}" == *clm* ]]; then
   sed -i "s#__geo_dir_clm__#$geo_dir_clm#" datm.streams.txt*
   sed -i "s#__topofile_clm__#$topofile_clm#" datm.streams.txt.topo.observed
   # forcing
-  sed -i "s#__forcdir__#${frc_dir}/eclm/forcing/#" datm.streams.txt.CLMCRUNCEPv7.*
+  sed -i "s#__forcdir__#${clm_frc_dir}#" datm.streams.txt.CLMCRUNCEPv7.*
   sed -i "s#__forclist__#${forcdatelist}#" datm.streams.txt.CLMCRUNCEPv7.*
   sed -i "s#__domainfile_clm__#$domainfile_clm#" datm.streams.txt.CLMCRUNCEPv7.*
 fi # if modelid == CLM
@@ -270,6 +273,9 @@ if [[ "${run_oasis}" == true ]]; then
 
   parse_config_file ${conf_file} "sim_config_oas"
 
+# set defaults
+  geo_dir_oas=${geo_dir_oas:-${geo_dir}/oasis/static}
+
 # copy namelist
   cp ${nml_dir}/oasis/namcouple_${modelid} namcouple
 
@@ -285,9 +291,9 @@ if [[ "${run_oasis}" == true ]]; then
   sed -i "s/__parflowgpy__/$pfl_ngy/" namcouple
 
 # copy remap-files
-  [[ "$lreal" == "true" ]] && cp ${geo_dir}/oasis/static/masks.nc .
+  [[ "$lreal" == "true" ]] && cp ${geo_dir_oas}/masks.nc .
   if [[ "${modelid}" == *parflow* ]]; then
-    cp ${geo_dir}/oasis/static/rmp* .
+    cp ${geo_dir_oas}/rmp* .
   fi
 
 fi # if modelid == oasis

dta/forcing/eclm/forcing

@@ -0,0 +1 @@
+../../geo/eclm/forcing