staple-paper

supplementary materials pages (made from this repo): https://fertiglab.github.io/staple-paper/

brain dataset

• Data paper: https://www.biorxiv.org/content/10.1101/2025.09.10.675374v1.full.pdf
• Data: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307586
• Atlas: https://alleninstitute.github.io/HMBA_BasalGanglia_Consensus_Taxonomy/

PDAC dataset

• Data paper: https://www.biorxiv.org/content/10.64898/2026.03.03.709150v1
• Atlas: https://aacrjournals.org/clincancerres/article/31/4/756/751743/Human-Pancreatic-Cancer-Single-Cell-Atlas-Reveals