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Merged
javier-gracia-tabuenca-tuni merged 2 commits into from
Nov 18, 2025
Merged

Development #29

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38282cd
added cache population in runApiServer start up
javier-gracia-tabuenca-tuni Nov 18, 2025
598cfef
v2.1.1
javier-gracia-tabuenca-tuni Nov 18, 2025
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
Package: ROMOPAPI
Title: ROMOPAPI
Version: 2.1.0
Version: 2.1.1
Authors@R:
person("Javier", "Gracia-Tabuenca", , "javier.graciatabuenca@tuni.fi", role = c("aut", "cre"),
comment = c(ORCID = "YOUR-ORCID-ID"))
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -22,7 +22,7 @@ RUN apt-get update && apt-get install -y openjdk-8-jdk liblzma-dev libbz2-dev li

# Install renv and restore packages
ARG ROMOPAPI_BRANCH=main
ARG BUILD_CACHE_BUSTER=2
ARG BUILD_CACHE_BUSTER=3

# Install renv and restore packages
RUN --mount=type=secret,id=build_github_pat \
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3 changes: 3 additions & 0 deletions NEWS.md
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@@ -1,3 +1,6 @@
# ROMOPAPI 2.1.1
- Added caching concepts with code counts at startup

# ROMOPAPI 2.1.0
- Added getAPIInfo endpoint to API
- Updated db with large tree
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5 changes: 5 additions & 0 deletions R/runApiServer.R
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Expand Up @@ -65,6 +65,11 @@ runApiServer <- function(
createCodeCountsTables(CDMdbHandler, codeCountsTable = "code_counts")
}

# Call getConceptsWithCodeCounts, to populate the cache
ParallelLogger::logInfo("Populating cache with concepts with code counts")
getConceptsWithCodeCounts_memoise(CDMdbHandler)


# Create plumber router
pathToPlumberFile <- system.file("plumber", "plumber.R", package = "ROMOPAPI")

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