Data Toolchain for NCQE XS analysis

configfiles/NCQE_XS_Data/ANNIEEventTreeMakerConfig

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+ANNIEEventTreeMakerVerbosity 0
+
+fillAllTriggers 1
+fill_singleTrigger 0
+fillLAPPDEventsOnly 0
+TankCluster_fill 1
+cluster_TankHitInfo_fill 1
+
+ApplyDeadMask 1
+VertexLeastSquares 1
+
+TankReco_fill 0
+
+OutputFile ANNIETree.root
+TankClusterProcessing 1
+MRDClusterProcessing 1
+TriggerProcessing 1
+TankHitInfo_fill 1
+MRDHitInfo_fill 1
+MRDReco_fill 1
+SiPMPulseInfo_fill 0
+fillCleanEventsOnly 0
+MCTruth_fill 0
+Reco_fill 1
+RecoDebug_fill 0
+muonTruthRecoDiff_fill 0
+isData 1
+HasGenie 0
+RingCounting_fill 0
+
+LAPPDData_fill 0
+LAPPDReco_fill 0
+RWMBRF_fill 1
+LAPPD_PPS_fill 0
+LAPPD_Waveform_fill 0

configfiles/NCQE_XS_Data/ClusterClassifiersConfig

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+verbosity 0

configfiles/NCQE_XS_Data/ClusterFinderConfig

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+# ClusterFinder Config File
+
+verbosity 0
+HitStore Hits #Either MCHits or Hits (accessed in ANNIEEvent store)
+ApplyDeadMask 1
+OutputFile BeamRun_ClusterFinder_DefaultOutput #Output root prefix name for the current run
+ClusterFindingWindow 40 # in ns, size of the window used to "clusterize"
+AcqTimeWindow 70000 # in ns, size of the acquisition window
+ClusterIntegrationWindow 40 # in ns, all hits with +/- 1/2 of this window are considered in the cluster
+MinHitsPerCluster 10 # group of hits are considered clusters above this amount of hits
+end_of_window_time_cut 0.95 # from o to 1, length of the window you want to loop over with respect to acq. window (1 for full window, 0.95 for 95% from the start)
+Plots2D 0 #Draw 2D charge-vs-time plots?
+ChankeyToPMTIDMap ./configfiles/EventDisplay/Data-RecoEvent/Chankey_WCSimID.dat

configfiles/NCQE_XS_Data/EventSelectorConfig

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+# EventSelector config file
+
+verbosity 0
+MCPMTVolCut 0
+MCFVCut 0
+MCMRDCut 0
+MCPiKCut 0
+MCIsMuonCut 0
+MCIsElectronCut 0
+MCIsSingleRingCut 0
+MCIsMultiRingCut 0
+MCProjectedMRDHit 0
+MCEnergyCut 0
+Emin 0		#Minimum energy in MeV
+Emax 1000	#Maximum energy in MeV
+MRDRecoCut 0
+RecoPMTVolCut 0
+RecoFVCut 0
+NHitCut 0
+NHitmin 4	#Minimum number of hit digits
+PMTMRDCoincCut 0
+PMTMRDOffset 755
+PromptTrigOnly 0
+TriggerWord -1
+SaveStatusToStore 1
+NoVeto 0
+Veto 0
+ThroughGoing 0
+IsMC 0		#MC or Data?

configfiles/NCQE_XS_Data/FindMrdTracksConfig

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+# FindMrdTracks Config File
+# all variables retrieved with m_variables.Get() must be defined here!
+
+verbosity 0
+IsData 1
+OutputDirectory .
+OutputFile STEC_MRDTracks_cluster40ns
+DrawTruthTracks 0 # whether to add MC Truth track info for drawing in MrdPaddlePlot Tool
+                  ## note you need to run that tool to actually view the tracks!
+WriteTracksToFile 0	# should the track information be written to a ROOT-file?
+SelectTriggerType 0	#should the loaded data be filtered by trigger type?
+TriggerType Beam	#options: Cosmic, Beam, No Loopback

configfiles/NCQE_XS_Data/FitRWMWaveformConfig

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+verbosityFitRWMWaveform 0
+printToRootFile 0

configfiles/NCQE_XS_Data/LoadANNIEEventConfig

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+verbose 1
+FileForListOfInputs ./configfiles/NCQE_XS_Data/my_inputs.txt
+EventOffset 0
+GlobalEvNr 1

configfiles/NCQE_XS_Data/TimeClusteringConfig

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+#TimeClustering config file
+
+verbosity 0
+MinDigitsForTrack 3
+MaxMrdSubEventDuration 30
+MinSubeventTimeSep 30
+MakeMrdDigitTimePlot 0
+LaunchTApplication 0
+IsData 1
+#OutputROOTFile TimeClustering_MRDTest28_cluster40ns
+OutputROOTFile STEC_TimeClusteringOut
+MapChankey_WCSimID ./configfiles/SimpleTankEnergyCalibrator/MRD_Chankey_WCSimID.dat
+

configfiles/NCQE_XS_Data/ToolChainConfig

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+#ToolChain dynamic setup file
+
+##### Runtime Paramiters #####
+verbose 1
+error_level 0 # 0= do not exit, 1= exit on unhandeled errors only, 2= exit on unhandeled errors and handeled errors
+attempt_recover 1
+
+###### Logging #####
+log_mode Interactive # Interactive=cout , Remote= remote logging system "serservice_name Remote_Logging" , Local = local file log;
+log_local_path ./log
+log_service LogStore
+
+###### Service discovery #####
+service_publish_sec -1
+service_kick_sec -1
+
+##### Tools To Add #####
+Tools_File ./configfiles/NCQE_XS_Data/ToolsConfig
+
+##### Run Type #####
+Inline -1
+Interactive 0
+

configfiles/NCQE_XS_Data/ToolsConfig

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+myLoadANNIEEvent LoadANNIEEvent ./configfiles/NCQE_XS_Data/LoadANNIEEventConfig
+myLoadGeometry LoadGeometry ./configfiles/LoadGeometry/LoadGeometryConfig
+myTimeClustering TimeClustering configfiles/NCQE_XS_Data/TimeClusteringConfig
+myFindMrdTracks FindMrdTracks configfiles/NCQE_XS_Data/FindMrdTracksConfig
+myClusterFinder ClusterFinder ./configfiles/NCQE_XS_Data/ClusterFinderConfig
+myClusterClassifiers ClusterClassifiers ./configfiles/NCQE_XS_Data/ClusterClassifiersConfig
+myEventSelector EventSelector ./configfiles/NCQE_XS_Data/EventSelectorConfig
+FitRWMWaveform FitRWMWaveform ./configfiles/NCQE_XS_Data/FitRWMWaveformConfig
+VertexLeastSquares VertexLeastSquares configfiles/NCQE_XS_Data/VertexLeastSquaresConfig
+ANNIEEventTreeMaker ANNIEEventTreeMaker ./configfiles/NCQE_XS_Data/ANNIEEventTreeMakerConfig

configfiles/NCQE_XS_Data/VertexLeastSquaresConfig

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+verbosity 0
+UseMCHits 0
+BreakDist 0.005
+YSpacing 0.1
+NPlanarPoints 100
+Regularizer 0
+FittingSteps 200
+FilterHitsCompatibleWindow 0
+OnlyUseReliablePMTs 1
+MinimumReliableTimingStd 1.5
+
+ExternalSeeding 1
+YBuffer 1.0
+RadialBuffer 1.0
+ExternalVertexMaxRadius 4.0
+ExternalVertexMaxHeight 4.0