ipython notebook widget not displaying

[xwyan1230]

Hi, I'm trying to use UNet to train a model. I managed to set up the environment which finally loads everything but run into issues of seeing all the regions for putting in parameters (see picture attached). I believe there is a widget somewhere but couldn't figure out how to make it display. I wonder if there might be any necessary packages to support this? Any ideas?

Thank you!

[tpecot]

Hi, I'm glad to see that you managed to do most of it. You're right, you should get options to define the parameters, sometimes it looks like what you have, most fo the time re-running the block is sufficient to make it work. If not, I'm afraid that your environment is lacking dome packages/installations and it's pretty hard to debug remotely. Hope this will help, Thierry De: "Xiaowei Yan" ***@***.***> À: "tpecot/DeepLearningForBiologists_FromClassificationToSegmentation" ***@***.***> Cc: "Subscribed" ***@***.***> Envoyé: Mercredi 22 Janvier 2025 23:54:32 Objet: [tpecot/DeepLearningForBiologists_FromClassificationToSegmentation] ipython notebook widget not displaying (Issue #5) Hi, I'm trying to use UNet to train a model. I managed to set up the environment which finally loads everything but run into issues of seeing all the regions for putting in parameters (see picture attached). I believe there is a widget somewhere but couldn't figure out how to make it display. I wonder if there might be any necessary packages to support this? Any ideas? Thank you! [ https://github.com/user-attachments/assets/65144d34-4b93-407c-869e-7b0124d581f4 | Screenshot.2025-01-22.at.2.49.29.PM.png (view on web) ] — Reply to this email directly, [ #5 | view it on GitHub ] , or [ https://github.com/notifications/unsubscribe-auth/AIWMJIJKPTEDZL2CYKHPLFL2MAOSRAVCNFSM6AAAAABVWAWUOCVHI2DSMVQWIX3LMV43ASLTON2WKOZSHAYDKNJQGYYDKNI | unsubscribe ] . You are receiving this because you are subscribed to this thread. Message ID: <tpecot/DeepLearningForBiologists_FromClassificationToSegmentation/issues/5 @ github . com>

[xwyan1230]

I see. Unfortunately it won't display even after rerun or shutdown/re-run. I wonder if you can share a few lines for displaying your widget so that I could try troubleshoot my ipython Notebook separately?

[xwyan1230]

Also if you would be able to check the version of your ipykernel? I wonder if this could be the issue.

[tpecot]

Hi, I'm really sorry, I'm not sure it's gonna help, when I open my notebook, I get ss1.png (attached to this email), then I run the first panel (ss2.png) and the second opens the widget (ss3.png). If you installed the list of python packages as shwon in the tutorial, it should work (even though I haven't tested since last March), it might be realted to your Qt package (not sure at all), you can check which version you have, I have QtPy==2.4.2. I hope this will help. Best, Thierry De: "Xiaowei Yan" ***@***.***> À: "tpecot/DeepLearningForBiologists_FromClassificationToSegmentation" ***@***.***> Cc: "Thierry Pecot" ***@***.***>, "Comment" ***@***.***> Envoyé: Jeudi 23 Janvier 2025 23:22:39 Objet: Re: [tpecot/DeepLearningForBiologists_FromClassificationToSegmentation] ipython notebook widget not displaying (Issue #5) Also if you would be able to check the version of your ipykernel? I wonder if this could be the issue. — Reply to this email directly, [ #5 (comment) | view it on GitHub ] , or [ https://github.com/notifications/unsubscribe-auth/AIWMJIO5NQLIPNZO4HCET632MFTS7AVCNFSM6AAAAABVWAWUOCVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDMMJRGEZTMOJRGA | unsubscribe ] . You are receiving this because you commented. Message ID: <tpecot/DeepLearningForBiologists_FromClassificationToSegmentation/issues/5/2611136910 @ github . com>