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refactor(host): migrate IO and SQLite onto scoped lifecycle #467

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Job	Run time
Rust lint and tests	2m 19s
Select CLI matrix	9s
VS Code extension	42s
pd-vm CLI (ubuntu-latest)	1m 38s
pd-vm CLI (macos-latest)	1m 52s
pd-vm CLI (windows-latest)	3m 27s
	10m 7s