geofetch/pyproject.toml at master · pepkit/geofetch · GitHub

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[project]
name = "geofetch"
version = "0.12.11"
description = "Downloads data and metadata from GEO and SRA and creates standard PEPs."
readme = "README.md"
license = "BSD-2-Clause"
requires-python = ">=3.10"
authors = [
    { name = "Oleksandr Khoroshevskyi" },
    { name = "Nathan Sheffield" },
    { name = "Vince Reuter" },
    { name = "Nathan LeRoy" },
]
keywords = ["project", "bioinformatics", "sequencing", "ngs", "workflow"]
classifiers = [
    "Development Status :: 4 - Beta",
    "License :: OSI Approved :: BSD License",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
]
dependencies = [
    "colorama>=0.3.9",
    "logmuse>=0.3.0",
    "ubiquerg>=0.6.2",
    "requests>=2.28.1",
    "xmltodict>=0.13.0",
    "pandas>=1.5.3",
    "peppy>=0.40.6",
    "rich>=12.5.1",
    "coloredlogs>=15.0.1",
    "piper>=0.14.4",
]

[project.urls]
Homepage = "https://github.com/pepkit/geofetch/"

[project.scripts]
geofetch = "geofetch.__main__:main"
sraconvert = "geofetch.sraconvert:main"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.build]
include = ["geofetch/**"]

[project.optional-dependencies]
test = [
    "pytest",
]

[tool.pytest.ini_options]
addopts = "-rfE"
testpaths = ["tests"]

[tool.ruff]
line-length = 88

[tool.ruff.lint]
select = ["E", "F", "I"]
ignore = ["F403", "F405", "E501"]

[tool.ruff.lint.isort]
known-first-party = ["geofetch"]