I have learnt about NegBio from Coursera and tried to run the code on Colab.
I have installed NegBio with pip and imported the required modules including NegBioParser().
However, when I try to load parser = NegBioParser() the session crashes, the reason in logs was first NO CUDA detected. I fixed it and switched to GPU runtime. After loading all dependencies and loading parser, the session crashed again... it gives no message what's wrong, I can just see some logs such as :
gzip: stdout: Broken pipe.
OR
2022-07-13 17:54:43.937715: W tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:39] Overriding allow_growth setting because the TF_FORCE_GPU_ALLOW_GROWTH environment variable is set. Original config value was 0.
and then
Kernel restarted
I have learnt about NegBio from Coursera and tried to run the code on Colab.
I have installed NegBio with pip and imported the required modules including NegBioParser().
However, when I try to load parser = NegBioParser() the session crashes, the reason in logs was first NO CUDA detected. I fixed it and switched to GPU runtime. After loading all dependencies and loading parser, the session crashed again... it gives no message what's wrong, I can just see some logs such as :
gzip: stdout: Broken pipe.
OR
2022-07-13 17:54:43.937715: W tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:39] Overriding allow_growth setting because the TF_FORCE_GPU_ALLOW_GROWTH environment variable is set. Original config value was 0.
and then
Kernel restarted