diff --git a/roles/galaxyprojectdotorg.devbox/tasks/main.yml b/roles/galaxyprojectdotorg.devbox/tasks/main.yml index 0743fc6..2ce20d4 100644 --- a/roles/galaxyprojectdotorg.devbox/tasks/main.yml +++ b/roles/galaxyprojectdotorg.devbox/tasks/main.yml @@ -31,6 +31,9 @@ - supervisor - nodejs - npm + - r-base-core + - r-cran-getopt + - r-bioc-biocinstaller # Setup atom (https://atom.io/) ppa and install. - name: Add custom Galaxy PPA (used for atom package) @@ -217,3 +220,10 @@ become: True become_user: "{{ dev_user_name }}" when: galaxy_devbox_include_x + +- name: "Install R libraries" + become: True + shell: "R -e 'library(BiocInstaller); biocLite(c(\"{{ item }}\"))'" + with_items: + - Rgraphviz + - motifbreakR