The AlphaFold model version has changed from `v2` (in old code) to `v6` (in new code). Verify that AlphaFold v6 models are available for all proteins in your dataset, as older proteins may only have v2 or v4 models. Consider adding fallback logic to try multiple versions if v6 fails to load.

[APherwani]

The AlphaFold model version has changed from v2 (in old code) to v6 (in new code). Verify that AlphaFold v6 models are available for all proteins in your dataset, as older proteins may only have v2 or v4 models. Consider adding fallback logic to try multiple versions if v6 fails to load.

Originally posted by @Copilot in #81 (comment)