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NAMESPACE
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46 lines (45 loc) · 1.42 KB
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# Generated by roxygen2: do not edit by hand
import(IlluminaHumanMethylation450kanno.ilmn12.hg19)
import(IlluminaHumanMethylationEPICanno.ilm10b2.hg19)
importFrom(BiocParallel,MulticoreParam)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,SnowParam)
importFrom(BiocParallel,bplapply)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,makeGRangesListFromDataFrame)
importFrom(IRanges,IRanges)
importFrom(IRanges,subsetByOverlaps)
importFrom(S4Vectors,values)
importFrom(bumphunter,clusterMaker)
importFrom(bumphunter,getSegments)
importFrom(dplyr,"%>%")
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,full_join)
importFrom(dplyr,left_join)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,position_dodge)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggpubr,ggbarplot)
importFrom(lmerTest,lmer)
importFrom(matrixStats,colMins)
importFrom(purrr,reduce)
importFrom(readr,write_csv)
importFrom(reshape2,melt)
importFrom(stats,as.formula)
importFrom(stats,coef)
importFrom(stats,cor)
importFrom(stats,na.exclude)
importFrom(stats,p.adjust)
importFrom(stats,pnorm)
importFrom(stats,reshape)
importFrom(stats,residuals)
importFrom(tidyr,"%>%")
importFrom(tidyr,separate)
importFrom(utils,globalVariables)
importFrom(utils,write.csv)