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create_triplet_distance_based JASPAR DOWNLOAD ISSUE #7

@XiaoqiLuo

Description

@XiaoqiLuo

I am following the example code and have this issue.

triplet <- create_triplet_distance_based(
    region = rownames(dna.met.chr21),
    motif.search.window.size = 50,
    motif.search.p.cutoff = 10^-3,
    target.method = "genes.promoter.overlap",
    genome = "hg19",
    cores = 1
)

And the echo:

Finding target genes
Mapping regions to the closest gene
Looking for TFBS
adding rname 'https://testjaspar.uio.no/download/database/JASPAR2024.sqlite'
Error in bfcrpath(BiocFileCache(), url) : 
  not all 'rnames' found or unique.
In addition: Warning messages:
1: download failed
  web resource path: ‘https://testjaspar.uio.no/download/database/JASPAR2024.sqlite’
  local file path: ‘/home/ad/lxhome/l/luoxiao/Linux/.cache/R/BiocFileCache/524872a720bc_JASPAR2024.sqlite’
  reason: SSL peer certificate or SSH remote key was not OK: [testjaspar.uio.no] SSL certificate problem: certificate has expired 
2: bfcadd() failed; resource removed
  rid: BFC8
  fpath: ‘https://testjaspar.uio.no/download/database/JASPAR2024.sqlite’
  reason: download failed 
3: In value[[3L]](cond) : 
trying to add rname 'https://testjaspar.uio.no/download/database/JASPAR2024.sqlite' produced error:
  bfcadd() failed; see warnings()

Has anyone come across the same issue and found a solution?

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