Skip to content

Fine-mapping CS level output #510

Description

@gaow

Currently we output fine-mapping top_loci table that covers variant level information. However we largely ignored the CS / SER level information. I propose that we add a CS / SER summary with the following:

method, cs, start, end, cpip, log10bf, size, ld_min, ld_median

where start and end are the boundaries of CS; ld_min and ld_median are purity by different definitions.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions