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CHANGELOG_PARAMS
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- ADDED:
- REMOVED:
- MascotAdapter -- Annotates MS/MS spectra using Mascot
- XTandemAdapter -- Annotates MS/MS spectra using X! Tandem
- CHANGED PARAMETERS:
Tool name Added/removed Parameter name Type Default value Restrictions Supported formats
CometAdapter + enzyme string Trypsin Chymotrypsin,Chymotrypsin/P,CNBr,Trypsin,Arg-C,Arg-C/P,Asp-N,no cleavage,unspecific cleavage,Lys-C,Lys-N,Lys-C/P,PepsinA,Trypsin/P,leukocyte elastase,glutamyl endopeptidase
CometAdapter - enzyme string Trypsin Trypsin,Arg-C,glutamyl endopeptidase,no cleavage,unspecific cleavage,Arg-C/P,Asp-N,Chymotrypsin,Chymotrypsin/P,CNBr,Lys-C,Lys-N,Lys-C/P,PepsinA,Trypsin/P,leukocyte elastase
CometAdapter + second_enzyme string Chymotrypsin,Chymotrypsin/P,CNBr,Trypsin,Arg-C,Arg-C/P,Asp-N,no cleavage,unspecific cleavage,Lys-C,Lys-N,Lys-C/P,PepsinA,Trypsin/P,leukocyte elastase,glutamyl endopeptidase
CometAdapter - second_enzyme string Trypsin,Arg-C,glutamyl endopeptidase,no cleavage,unspecific cleavage,Arg-C/P,Asp-N,Chymotrypsin,Chymotrypsin/P,CNBr,Lys-C,Lys-N,Lys-C/P,PepsinA,Trypsin/P,leukocyte elastase
DecoyDatabase + enzyme string Trypsin 2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,Trypsin,Arg-C,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P
DecoyDatabase - enzyme string Trypsin Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,Trypsin,Arg-C,Arg-C/P,Asp-N,Asp-N/B,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P
Digestor + enzyme string Trypsin Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Trypsin,Arg-C,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N
Digestor - enzyme string Trypsin Trypsin,Arg-C,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,V8-DE,V8-E,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase
DigestorMotif + enzyme string Trypsin Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Trypsin,Arg-C,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N
DigestorMotif - enzyme string Trypsin Trypsin,Arg-C,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,leukocyte elastase,proline endopeptidase,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate
FeatureFinderCentroided - algorithm:debug bool false
FeatureFinderCentroided + algorithm:write_debug bool false
IDFileConverter + fasta_to_mzml:enzyme string Trypsin Arg-C/P,Asp-N,Asp-N/B,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Trypsin,Arg-C,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,leukocyte elastase,proline endopeptidase,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate
IDFileConverter - fasta_to_mzml:enzyme string Trypsin Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Trypsin,Arg-C,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,leukocyte elastase,proline endopeptidase,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate
IDFilter + in_silico_digestion:enzyme string Trypsin no cleavage,unspecific cleavage,Arg-C,Arg-C/P,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,Trypsin,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid
IDFilter - in_silico_digestion:enzyme string Trypsin V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,Lys-C/P,PepsinA,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,Formic_acid,Lys-C,Lys-N,Arg-C,Arg-C/P,Asp-N,no cleavage,unspecific cleavage,Trypsin,TrypChymo,Trypsin/P,V8-DE
IDFilter + missed_cleavages:enzyme string Trypsin no cleavage,unspecific cleavage,Arg-C,Arg-C/P,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,Trypsin,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid
IDFilter - missed_cleavages:enzyme string Trypsin V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,Lys-C/P,PepsinA,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,Formic_acid,Lys-C,Lys-N,Arg-C,Arg-C/P,Asp-N,no cleavage,unspecific cleavage,Trypsin,TrypChymo,Trypsin/P,V8-DE
IsobaricAnalyzer - extraction:reporter_mass_shift double 2.0000000000000000e-03 1.0e-04:0.5
IsobaricAnalyzer + extraction:reporter_mass_shift double 2.0e-03 1.0e-04:0.5
MapAlignerPoseClustering - algorithm:superimposer:scaling_bucket_size double 5.0000000000000000e-03 0.0:
MapAlignerPoseClustering + algorithm:superimposer:scaling_bucket_size double 5.0e-03 0.0:
MSFraggerAdapter + PeptideIndexing:enzyme:name string auto auto,Formic_acid,Lys-C,Lys-N,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Trypsin,Arg-C,Arg-C/P,Asp-N,Asp-N/B,TrypChymo,Trypsin/P,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Lys-C/P,PepsinA,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,V8-DE,V8-E,leukocyte elastase,proline endopeptidase
MSFraggerAdapter - PeptideIndexing:enzyme:name string auto auto,Lys-C/P,PepsinA,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Trypsin,Arg-C,Arg-C/P,Asp-N,Asp-N/B,TrypChymo,Trypsin/P,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Formic_acid,Lys-C,Lys-N,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,V8-DE,V8-E,leukocyte elastase,proline endopeptidase
MSGFPlusAdapter - PeptideIndexing:enzyme:name string auto auto,Arg-C,Arg-C/P,Trypsin,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,Lys-N,Lys-C/P,CNBr,Formic_acid,Lys-C
MSGFPlusAdapter + PeptideIndexing:enzyme:name string auto auto,Arg-C,Arg-C/P,Trypsin,CNBr,Formic_acid,Lys-C,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,Lys-N,Lys-C/P,PepsinA,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P
NoiseFilterGaussian - algorithm:gaussian_width double 0.2
NoiseFilterGaussian + algorithm:gaussian_width double 0.2 0.0:
NoiseFilterGaussian - algorithm:ppm_tolerance double 10.0
NoiseFilterGaussian + algorithm:ppm_tolerance double 10.0 0.0:
NucleicAcidSearchEngine - oligo:enzyme string no cleavage RNase_T1,mazF,colicin_E5,no cleavage,unspecific cleavage,RNase_T1_Phosphatase,cusativin,RNase_U2,RNase_A,RNase_MC1,RNase_H,RNase_4,RNase_4p,RNase_4c
NucleicAcidSearchEngine + oligo:enzyme string no cleavage RNase_T1,RNase_U2,RNase_A,RNase_MC1,RNase_H,RNase_T1_Phosphatase,colicin_E5,no cleavage,unspecific cleavage,cusativin,RNase_4,RNase_4p,RNase_4c,mazF
OpenPepXL - peptide:enzyme string Trypsin Trypsin,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,V8-DE,V8-E,leukocyte elastase,Arg-C,Arg-C/P,Asp-N,Lys-C/P,PepsinA,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,TrypChymo,Trypsin/P,Formic_acid,Lys-C,Lys-N
OpenPepXL + peptide:enzyme string Trypsin Trypsin,V8-E,leukocyte elastase,Arg-C,Arg-C/P,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Lys-N,Lys-C/P,proline endopeptidase,glutamyl endopeptidase,PepsinA,TrypChymo,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,Trypsin/P,V8-DE,CNBr,Formic_acid,Lys-C,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage
OpenSwathAnalyzer + algorithm:apply_im_peak_picking bool false
OpenSwathAnalyzer + algorithm:merge_spectra_by_peak_width_fraction double 0.15 1.0e-04:1.0
OpenSwathAnalyzer - algorithm:Scores:use_sonar_scores bool false
OpenSwathAnalyzer - algorithm:spacing_for_spectra_resampling double 5.0000000000000000e-03 0.0:
OpenSwathAnalyzer + algorithm:spacing_for_spectra_resampling double 5.0e-03 0.0:
OpenSwathAnalyzer + algorithm:spectrum_merge_method_type string fixed fixed,dynamic
OpenSwathRTNormalizer + algorithm:apply_im_peak_picking bool false
OpenSwathRTNormalizer + algorithm:merge_spectra_by_peak_width_fraction double 0.15 1.0e-04:1.0
OpenSwathRTNormalizer - algorithm:Scores:use_sonar_scores bool false
OpenSwathRTNormalizer - algorithm:spacing_for_spectra_resampling double 5.0000000000000000e-03 0.0:
OpenSwathRTNormalizer + algorithm:spacing_for_spectra_resampling double 5.0e-03 0.0:
OpenSwathRTNormalizer + algorithm:spectrum_merge_method_type string fixed fixed,dynamic
OpenSwathWorkflow - out_features output-file *.featureXML
OpenSwathWorkflow + out_features output-file *.osw,*.featureXML
OpenSwathWorkflow + out_features_type string osw,featureXML
OpenSwathWorkflow - out_osw output-file *.osw
OpenSwathWorkflow - out_tsv output-file *.tsv
OpenSwathWorkflow + Scoring:apply_im_peak_picking bool false
OpenSwathWorkflow + Scoring:merge_spectra_by_peak_width_fraction double 0.15 1.0e-04:1.0
OpenSwathWorkflow - Scoring:Scores:use_sonar_scores bool false
OpenSwathWorkflow - Scoring:spacing_for_spectra_resampling double 5.0000000000000000e-03 0.0:
OpenSwathWorkflow + Scoring:spacing_for_spectra_resampling double 5.0e-03 0.0:
OpenSwathWorkflow + Scoring:spectrum_merge_method_type string fixed fixed,dynamic
OpenSwathWorkflow - sonar bool false
PeptideIndexer - enzyme:name string auto auto,glutamyl endopeptidase,Alpha-lytic protease,no cleavage,unspecific cleavage,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Trypsin,Arg-C,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR
PeptideIndexer + enzyme:name string auto auto,Lys-C,Lys-N,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Trypsin,Arg-C,Chymotrypsin/P,CNBr,Formic_acid,no cleavage,unspecific cleavage,Lys-C/P,PepsinA,TrypChymo,Trypsin/P
ProteinInference + Algorithm:score_type string ,PEP,q-value,RAW
RNADigestor + enzyme string RNase_T1 colicin_E5,no cleavage,unspecific cleavage,RNase_MC1,RNase_H,RNase_4,RNase_4p,RNase_4c,mazF,RNase_T1_Phosphatase,cusativin,RNase_U2,RNase_A,RNase_T1
RNADigestor - enzyme string RNase_T1 RNase_T1_Phosphatase,cusativin,RNase_T1,RNase_U2,RNase_A,RNase_MC1,RNase_H,RNase_4,RNase_4p,RNase_4c,mazF,colicin_E5,no cleavage,unspecific cleavage
SageAdapter + enzyme string Trypsin Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,glutamyl endopeptidase,Alpha-lytic protease,no cleavage,unspecific cleavage,Trypsin,Arg-C,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR
SageAdapter - enzyme string Trypsin Trypsin,Arg-C,no cleavage,unspecific cleavage,glutamyl endopeptidase,Alpha-lytic protease,Arg-C/P,Asp-N,Asp-N/B,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR
SageAdapter - PeptideIndexing:enzyme:name string auto auto,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,V8-DE,V8-E,leukocyte elastase,proline endopeptidase,Trypsin,Lys-C/P,PepsinA,TrypChymo,Trypsin/P,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N,Arg-C,Arg-C/P,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,glutamyl endopeptidase,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR
SageAdapter + PeptideIndexing:enzyme:name string auto auto,Lys-C/P,PepsinA,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,unspecific cleavage,TrypChymo,Trypsin/P,V8-DE,V8-E,Arg-C,Arg-C/P,Asp-N,Trypsin,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,Formic_acid,Lys-C,Lys-N,Alpha-lytic protease,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR
SequenceCoverageCalculator + out output-file *.idXML
SequenceCoverageCalculator - out output-file *.txt
SimpleSearchEngine + Search:enzyme string Trypsin Trypsin,Arg-C,TrypChymo,Trypsin/P,V8-DE,V8-E,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Lys-C/P,PepsinA,Arg-C/P,Asp-N,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,Lys-C,Lys-N,Chymotrypsin/P,CNBr,Formic_acid,Asp-N/B,Asp-N_ambic,Chymotrypsin
SimpleSearchEngine - Search:enzyme string Trypsin Trypsin,TrypChymo,Trypsin/P,V8-DE,V8-E,2-iodobenzoate,iodosobenzoate,staphylococcal protease/D,proline-endopeptidase/HKR,Glu-C+P,PepsinA + P,cyanogen-bromide,Clostripain/P,elastase-trypsin-chymotrypsin,no cleavage,unspecific cleavage,Lys-C/P,PepsinA,Arg-C,Arg-C/P,leukocyte elastase,proline endopeptidase,glutamyl endopeptidase,Alpha-lytic protease,Asp-N,Asp-N/B,Asp-N_ambic,Chymotrypsin,Chymotrypsin/P,CNBr,Formic_acid,Lys-C,Lys-N