What steps does it take to reproduce the issue?
When a file is uploaded, there are usually some upload files left in the system, in two spots.
- dataverse.files.file.directory
- /payara6/glassfish/domains/domain1/uploads
I think it's related to this issue, but not sure why it's not fixed in our setup: #10667
Files are left behind in: dataverse.files.file.directory. Here's a small sample:
-rw-r--r--. 1 dataverse dataverse 831213413 Jun 1 15:39 19e83d716d8-f6e08e442fd9
-rw-r--r--. 1 dataverse dataverse 838353413 Jun 1 15:39 19e83d75d03-bcba11fda004
-rw-r--r--. 1 dataverse dataverse 835973455 Jun 1 15:40 19e83d7a49f-4d11683f60bc
-rw-r--r--. 1 dataverse dataverse 10036 Jun 1 19:02 tempIngestSourceFile14944432732260873865.tmp
-rw-r--r--. 1 dataverse dataverse 255 Jun 1 19:02 firstpass-2728339230294518051.tab
-rw-r--r--. 1 dataverse dataverse 14065 Jun 1 19:02 tempIngestSourceFile674369604737836795.tmp
-rw-r--r--. 1 dataverse dataverse 99 Jun 1 19:02 firstpass-11771889047601741684.tab
-rw-r--r--. 1 dataverse dataverse 14853 Jun 1 19:02 tempIngestSourceFile16848639504657575746.tmp
-rw-r--r--. 1 dataverse dataverse 153 Jun 1 19:02 firstpass-1044911828866616382.tab
-rw-r--r--. 1 dataverse dataverse 15074 Jun 1 19:02 tempIngestSourceFile479945955968724125.tmp
-rw-r--r--. 1 dataverse dataverse 232 Jun 1 19:02 firstpass-12198861583407135376.tab
Sometimes these files are larger, depending on the upload.
As well as in: /payara6/glassfish/domains/domain1/uploads:
-rw-r--r--. 1 dataverse dataverse 17 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034335.tmp
-rw-r--r--. 1 dataverse dataverse 44 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034332.tmp
-rw-r--r--. 1 dataverse dataverse 34 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034329.tmp
-rw-r--r--. 1 dataverse dataverse 47 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034326.tmp
-rw-r--r--. 1 dataverse dataverse 22 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034350.tmp
-rw-r--r--. 1 dataverse dataverse 22 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034349.tmp
-rw-r--r--. 1 dataverse dataverse 45 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034348.tmp
These do not automatically get cleaned up by the code at all, though I thought this was fixed by #10867
Which version of Dataverse are you using?
6.6
Any related open or closed issues to this bug report?
#10867
Screenshots:
No matter the issue, screenshots are always welcome.
To add a screenshot, please use one of the following formats and/or methods described here:
Are you thinking about creating a pull request for this issue?
Help is always welcome, is this bug something you or your organization plan to fix?
What steps does it take to reproduce the issue?
When a file is uploaded, there are usually some upload files left in the system, in two spots.
I think it's related to this issue, but not sure why it's not fixed in our setup: #10667
When does this issue occur?
This issue occurs after a file is uploaded via the UI
Which page(s) does it occurs on?
File upload through the UI.
What happens?
Files are left behind in: dataverse.files.file.directory. Here's a small sample:
-rw-r--r--. 1 dataverse dataverse 831213413 Jun 1 15:39 19e83d716d8-f6e08e442fd9
-rw-r--r--. 1 dataverse dataverse 838353413 Jun 1 15:39 19e83d75d03-bcba11fda004
-rw-r--r--. 1 dataverse dataverse 835973455 Jun 1 15:40 19e83d7a49f-4d11683f60bc
-rw-r--r--. 1 dataverse dataverse 10036 Jun 1 19:02 tempIngestSourceFile14944432732260873865.tmp
-rw-r--r--. 1 dataverse dataverse 255 Jun 1 19:02 firstpass-2728339230294518051.tab
-rw-r--r--. 1 dataverse dataverse 14065 Jun 1 19:02 tempIngestSourceFile674369604737836795.tmp
-rw-r--r--. 1 dataverse dataverse 99 Jun 1 19:02 firstpass-11771889047601741684.tab
-rw-r--r--. 1 dataverse dataverse 14853 Jun 1 19:02 tempIngestSourceFile16848639504657575746.tmp
-rw-r--r--. 1 dataverse dataverse 153 Jun 1 19:02 firstpass-1044911828866616382.tab
-rw-r--r--. 1 dataverse dataverse 15074 Jun 1 19:02 tempIngestSourceFile479945955968724125.tmp
-rw-r--r--. 1 dataverse dataverse 232 Jun 1 19:02 firstpass-12198861583407135376.tab
Sometimes these files are larger, depending on the upload.
As well as in: /payara6/glassfish/domains/domain1/uploads:
-rw-r--r--. 1 dataverse dataverse 17 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034335.tmp
-rw-r--r--. 1 dataverse dataverse 44 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034332.tmp
-rw-r--r--. 1 dataverse dataverse 34 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034329.tmp
-rw-r--r--. 1 dataverse dataverse 47 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034326.tmp
-rw-r--r--. 1 dataverse dataverse 22 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034350.tmp
-rw-r--r--. 1 dataverse dataverse 22 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034349.tmp
-rw-r--r--. 1 dataverse dataverse 45 Jun 1 19:02 upload_5df8c250_19e698dd064__7feb_00034348.tmp
These do not automatically get cleaned up by the code at all, though I thought this was fixed by #10867
To whom does it occur (all users, curators, superusers)?
All users, I think. Other installs have this issue as well, post 6.4. #troubleshooting > Uploads directory content not clearing after 6.2 upgrade @ 💬
What did you expect to happen?
I expected the files to disappear when the upload/conversion was done. Instead they stick around.
Which version of Dataverse are you using?
6.6
Any related open or closed issues to this bug report?
#10867
Screenshots:
No matter the issue, screenshots are always welcome.
To add a screenshot, please use one of the following formats and/or methods described here:
Are you thinking about creating a pull request for this issue?
Help is always welcome, is this bug something you or your organization plan to fix?