Dividing the code into library and executable

[Dzess]

Synopsis

Code is too large and one JAR has to many responsibilities.

Details

Current implementation lacks from the usability issues. If someone would like to use this code he would be hampered with all classes for reading data and running the algorithm.

There is proposal to split the responsibilities between two or even more projects, providing the ability to use only algorithms.
The resulting libraries should be grouped into 3 new maven projects:

• dmarf.core algorithms, data representation format, jocl setups
• dmarf.input the whole builder thing used for getting the data in the right representation
• dmar.runnner the command line tool which will behave the same way as the main program now