content

Field Guide Content

This folder contains the current Bioinformatics Field Guide articles and supporting resources.

Published Guides

No.	Guide	Resource
01	How to Set Up Your Laptop for Bioinformatics	Week 1 setup resources
02	What Programming Languages Should a Bioinformatician Know?	Week 2 notebooks and language map
03	The Bioinformatics File Types You Must Know	Week 3 file-format lab
04	Bulk RNA-seq Field Guide: From Reads To Rigorous Differential Expression	Week 4 RNA-seq and DESeq2 resources
05	Nextflow For Bioinformatics: The Big Picture Before You Run nf-core/rnaseq	Week 5 Nextflow and nf-core/rnaseq resources
06	Build Your First Custom Nextflow Pipeline For Oxford Nanopore Data	Week 6 custom ONT Nextflow resources

Future articles are not listed here until they are publication-ready.

Resources

Supporting files live in resources/, including environment files, Docker files, notebooks, small demo data, and helper scripts.