Below two queries return the same output:
LDmatrix(snps = c("chr13:32444611", "chr13:32509120"),
pop = "EUR", r2d = "r2",
token = LDLINK_TOKEN)
LDmatrix(snps = c("chr13:32509120", "chr13:32444611"),
pop = "EUR", r2d = "r2",
token = LDLINK_TOKEN)
# RS_number rs496202 rs11147477
# 1 rs496202 1.000 0.202
# 2 rs11147477 0.202 1.000This is fine when we supply rsids instead of positions, we could just match them up by rsid. But when we supply chr:pos, then it is not easy to map chr:pos to output.
Could we have an argument sort = TRUE/FALSE ?
Below two queries return the same output:
This is fine when we supply rsids instead of positions, we could just match them up by rsid. But when we supply chr:pos, then it is not easy to map chr:pos to output.
Could we have an argument
sort = TRUE/FALSE?