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The vcf file produced by writeVCF is only read correctly by the read.vcf function in pegas if it is unix-formatted. If running in windows, convert to unix format before using pegas. (Not sure if this is a pegas or KGD issue).
The vcf file produced by writeVCF is only read correctly by the read.vcf function in pegas if it is unix-formatted. If running in windows, convert to unix format before using pegas. (Not sure if this is a pegas or KGD issue).