Describe the bug
I had an sf object which I passed into the fdmr::mesh_builder() function, but I got the following error when the shiny app was loading:
test <- df |>
sf::st_as_sf() |>
sf::st_transform(sf::st_crs("+proj=longlat +datum=WGS84"))
fdmr::mesh_builder(
spatial_data = test,
x_coord = "long",
y_coord = "lat"
)
Warning in value[3L] :
Unable to read CRS from data, using default CRS = '+proj=longlat +datum=WGS84'
Listening on http://127.0.0.1:4044
Warning: Error in sf::st_sfc: use st_as_sfc() to extract geometries from an sf object
178: stop
177: sf::st_sfc
174: fm_unify_coords.sf
172: fmesher::fm_mesh_2d_inla
171: eventReactiveValueFunc
127: mesh
119:
103: mesh_spatial
98: ::
htmlwidgets
shinyRenderWidget
97: func
84: renderFunc
83: output$map
2: shiny::runApp
1: fdmr::mesh_builder
Expected behavior
I expected the shiny app to load my sf object with the expected mesh builder options
To Reproduce
See above
User Environment (please complete the following information):
─ Session info ──────────────────────────────────────────────────────────────
setting value
version R version 4.3.3 (2024-02-29 ucrt)
os Windows 10 x64 (build 19045)
system x86_64, mingw32
ui RStudio
language (EN)
collate English_United Kingdom.utf8
ctype English_United Kingdom.utf8
tz Europe/London
date 2024-03-26
rstudio 2023.12.1+402 Ocean Storm (desktop)
pandoc 3.1.1 @ C:/Users/Sebastian.Fox/AppData/Local/Programs/RStudio/resources/app/bin/quarto/bin/tools/ (via rmarkdown)
─ Packages ──────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
base64enc 0.1-3 2015-07-28 [1] CRAN (R 4.3.1)
bslib 0.6.2 2024-03-22 [1] CRAN (R 4.3.3)
cachem 1.0.8 2023-05-01 [1] CRAN (R 4.3.3)
class 7.3-22 2023-05-03 [1] CRAN (R 4.3.3)
classInt 0.4-10 2023-09-05 [1] CRAN (R 4.3.3)
cli 3.6.2 2023-12-11 [1] CRAN (R 4.3.3)
codetools 0.2-19 2023-02-01 [1] CRAN (R 4.3.3)
colorspace 2.1-0 2023-01-23 [1] CRAN (R 4.3.3)
crayon 1.5.2 2022-09-29 [1] CRAN (R 4.3.3)
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curl 5.2.1 2024-03-01 [1] CRAN (R 4.3.3)
DBI 1.2.2 2024-02-16 [1] CRAN (R 4.3.3)
devtools 2.4.5 2022-10-11 [1] CRAN (R 4.3.3)
digest 0.6.35 2024-03-11 [1] CRAN (R 4.3.3)
dplyr * 1.1.4 2023-11-17 [1] CRAN (R 4.3.3)
e1071 1.7-14 2023-12-06 [1] CRAN (R 4.3.3)
ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.3.3)
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fansi 1.0.6 2023-12-08 [1] CRAN (R 4.3.3)
fastmap 1.1.1 2023-02-24 [1] CRAN (R 4.3.3)
fdmr * 0.2.0 2024-03-25 [1] Github (4DModeller/fdmr@6afa86c)
fmesher 0.1.5 2023-12-20 [1] CRAN (R 4.3.3)
fs 1.6.3 2023-07-20 [1] CRAN (R 4.3.3)
generics 0.1.3 2022-07-05 [1] CRAN (R 4.3.3)
ggplot2 3.5.0 2024-02-23 [1] CRAN (R 4.3.3)
glue 1.7.0 2024-01-09 [1] CRAN (R 4.3.3)
gridExtra 2.3 2017-09-09 [1] CRAN (R 4.3.3)
gtable 0.3.4 2023-08-21 [1] CRAN (R 4.3.3)
htmltools 0.5.7 2023-11-03 [1] CRAN (R 4.3.3)
htmlwidgets 1.6.4 2023-12-06 [1] CRAN (R 4.3.3)
httpuv 1.6.14 2024-01-26 [1] CRAN (R 4.3.3)
INLA 24.02.09 2024-02-09 [1] local
jquerylib 0.1.4 2021-04-26 [1] CRAN (R 4.3.3)
jsonlite 1.8.8 2023-12-04 [1] CRAN (R 4.3.3)
KernSmooth 2.23-22 2023-07-10 [1] CRAN (R 4.3.3)
knitr 1.45 2023-10-30 [1] CRAN (R 4.3.3)
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scales 1.3.0 2023-11-28 [1] CRAN (R 4.3.3)
sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.3.3)
sf 1.0-16 2024-03-24 [1] CRAN (R 4.3.3)
shiny * 1.8.0 2023-11-17 [1] CRAN (R 4.3.3)
shinybusy 0.3.3 2024-03-09 [1] CRAN (R 4.3.3)
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tidyselect 1.2.1 2024-03-11 [1] CRAN (R 4.3.3)
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urlchecker 1.0.1 2021-11-30 [1] CRAN (R 4.3.3)
usethis 2.2.3 2024-02-19 [1] CRAN (R 4.3.3)
utf8 1.2.4 2023-10-22 [1] CRAN (R 4.3.3)
vctrs 0.6.5 2023-12-01 [1] CRAN (R 4.3.3)
withr 3.0.0 2024-01-16 [1] CRAN (R 4.3.3)
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xtable 1.8-4 2019-04-21 [1] CRAN (R 4.3.3)
yaml 2.3.8 2023-12-11 [1] CRAN (R 4.3.2)
Describe the bug
I had an sf object which I passed into the
fdmr::mesh_builder()function, but I got the following error when the shiny app was loading:Expected behavior
I expected the shiny app to load my sf object with the expected mesh builder options
To Reproduce
See above
User Environment (please complete the following information):